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Tracing 2D Growth of Pancreatic Tumoroids Using the Combination of Image Processing Techniques and Mini-Opto Tomography Imaging System

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dc.contributor.author Akbaba, Cihat Ediz
dc.contributor.author Polat, Adem
dc.contributor.author Gokturk, Dilek
dc.date.accessioned 2023-10-19T07:44:46Z
dc.date.available 2023-10-19T07:44:46Z
dc.date.issued 2023-07
dc.identifier.citation Akbaba, C. E., Polat, A., & Göktürk, D. (2023). Tracing 2D Growth of Pancreatic Tumoroids Using the Combination of Image Processing Techniques and Mini-Opto Tomography Imaging System. Technology in Cancer Research & Treatment, 22, 15330338231164267. https://doi.org/10.1177/15330338231164267 tr_TR
dc.identifier.issn 1533-0346
dc.identifier.issn 1533-0338
dc.identifier.uri http://openacccess.atu.edu.tr:8080/xmlui/handle/123456789/4228
dc.identifier.uri http://dx.doi.org/10.1177/15330338231164267
dc.description WOS indeksli yayınlar koleksiyonu. / WOS indexed publications collection. tr_TR
dc.description.abstract Objectives: In this study, we aimed to trace the 2D growth development of tumoroids produced with MIA PaCa-2 pancreatic cancer cells at different time points. Methods We cultured 3 different tumoroids with 0.5%, 0.8%, and 1.5% agarose concentrations and calculated the growth rate of the tumoroids with their images acquired at 9 imaging time points by mini-Opto tomography imaging system applying image processing techniques. We used the metrics contrast-to-noise ratio (CNR), peak signal-to-noise ratio (PSNR), and mean squared error (MSE) to analyze the distinguishability of the tumoroid structure from its surroundings, quantitatively. Additionally, we calculated the increase of the radius, the perimeter, and the area of 3 tumoroids over a time period. Results In the quantitative assessment, the bilateral and Gaussian filters gave the highest CNR values (ie, Gaussian filter: at each of 9 imaging time points in range of 1.715 to 15.142 for image set-1). The median filter gave the highest values in PSNR in the range of 43.108 to 47.904 for image set-2 and gave the lowest values in MSE in the range of 0.604 to 2.599 for image set-3. The areas of tumoroids with 0.5%, 0.8%, and 1.5% agarose concentrations were 1.014 mm(2), 1.047 mm(2), and 0.530 mm(2) in the imaging time point-1 and 33.535 mm(2), 4.538 mm(2), and 2.017 mm(2) in the imaging time point-9. The tumoroids with 0.5%, 0.8%, and 1.5% agarose concentrations grew up to times of 33.07, 4.33, and 3.80 in area size over this period, respectively. Conclusions The growth rate and the widest borders of the different tumoroids in a time interval could be detected automatically and successfully. This study that combines the image processing techniques with mini-Opto tomography imaging system ensured significant results in observing the tumoroid's growth rate and enlarging border over time, which is very critical to provide an emerging methodology in vitro cancer studies. tr_TR
dc.language.iso en tr_TR
dc.publisher TECHNOLOGY IN CANCER RESEARCH & TREATMENT / SAGE PUBLICATIONS INC tr_TR
dc.relation.ispartofseries 2023;Volume: 22
dc.subject cancer cells tr_TR
dc.subject image processing techniques tr_TR
dc.subject image segmentation tr_TR
dc.subject pancreatic cancer tr_TR
dc.subject tumoroid tr_TR
dc.subject tumors tr_TR
dc.subject MIA PaCa-2 cells tr_TR
dc.subject mini-Opto tomography tr_TR
dc.title Tracing 2D Growth of Pancreatic Tumoroids Using the Combination of Image Processing Techniques and Mini-Opto Tomography Imaging System tr_TR
dc.type Article tr_TR


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