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An alternative approach to tracing the volumic proliferation development of an entire tumor spheroid in 3D through a mini-Opto tomography platform

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dc.contributor.author Polat, Adem
dc.contributor.author Gokturk, Dilek
dc.date.accessioned 2022-12-27T08:18:12Z
dc.date.available 2022-12-27T08:18:12Z
dc.date.issued 2021-01
dc.identifier.citation Polat, A., & Göktürk, D. (2022). An alternative approach to tracing the volumic proliferation development of an entire tumor spheroid in 3D through a mini-Opto tomography platform. Micron, 152, 103173. https://doi.org/10.1016/j.micron.2021.103173 tr_TR
dc.identifier.issn 0968-4328
dc.identifier.issn 1878-4291
dc.identifier.uri http://openacccess.atu.edu.tr:8080/xmlui/handle/123456789/4064
dc.identifier.uri http://dx.doi.org/10.1016/j.micron.2021.103173
dc.description WOS indeksli yayınlar koleksiyonu. / WOS indexed publications collection. tr_TR
dc.description.abstract Microscopy, which is listed among the major in-situ imaging applications, allows to derive information from a biological sample on the existing architectural structures of cells and tissues and their changes over time. Large biological samples such as tumor spheroids cannot be imaged within one field of view, regional imaging in different areas and subsequent stitching are required to attain the full picture. Microscopy is not typically used to produce full-size visualization of tumor spheroids measuring a few millimeters in size. In this study, we propose a 3D volume imaging technique for tracing the growth of an entire tumor spheroid measuring up to 10 mm using a miniaturized optical (mini-Opto) tomography platform. We performed a primary analysis of the 3D imaging for the MIA PaCa-2 pancreatic tumoroid employing its 2D images produced with the mini-Opto tomography from different angles ranging from -25 degrees to +25 degrees at six different three-day-apart time points of consecutive image acquisition. These 2D images were reconstructed by using a 3D image reconstruction algorithm that we developed based on the algebraic reconstruction technique (ART). We were able to reconstruct the 3D images of the tumomid to achieve 800 x 800-pixel 50-layer images at resolutions of 5-25 mu m. We also created its 3D visuals to understand more clearly how its volume changed and how it looked over weeks. The volume of the tumor was calculated to be 6.761 mm(3) at the first imaging time point and 46.899 mm(3) 15 days after the first (at the sixth time point), which is 6.94 times larger in volume. The mini-Opto tomography can be considered more advantageous than commercial microscopy because it is portable, more cost-effective, and easier to use, and enables full-size visualization of biological samples measuring a few millimeters in size. tr_TR
dc.language.iso en tr_TR
dc.publisher MICRON / ELSEVIER tr_TR
dc.relation.ispartofseries 2021;Volume: 152
dc.subject Tumoroid tr_TR
dc.subject 3D cell culture tr_TR
dc.subject Mini-Opto tomography tr_TR
dc.subject 3D image reconstruction tr_TR
dc.subject Algebraic reconstruction technique tr_TR
dc.subject Iterative reconstruction tr_TR
dc.subject 3D bioimaging tr_TR
dc.title An alternative approach to tracing the volumic proliferation development of an entire tumor spheroid in 3D through a mini-Opto tomography platform tr_TR
dc.type Article tr_TR


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